FastQCFastQC Report
Mon 25 Mar 2013
104.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 104.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 32498038
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 1362687 4.193136213330787 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1280916 3.941517946406488 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 1138076 3.5019837197556356 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 1077048 3.3141939214915066 RNA PCR Primer, Index 1 (100% over 26bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 873371 2.6874576243648924 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 692062 2.129550097762825 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 674768 2.0763345774904933 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 656723 2.0208081484796097 No Hit
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 626190 1.9268547842795924 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 603620 1.8574044377694432 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 600078 1.8465053182595208 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGTGGAATTCTCGGGTGCCAAGGAACTCC 544669 1.6760057945651983 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGGCTTTGGAATTCTCGGGTGCCAAGGA 397118 1.2219753081709117 RNA PCR Primer, Index 1 (100% over 22bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 351803 1.0825361211036801 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 345470 1.0630487908223876 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 324799 0.9994418739986703 RNA PCR Primer, Index 1 (100% over 27bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 317957 0.9783882953180127 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 292936 0.9013959550419628 RNA PCR Primer, Index 1 (100% over 29bp)
TCTCCCAACCCTTGTACCAGTGTTGGAATTCTCGGGTGCCAAGGAACTC 242877 0.7473589636395895 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 224084 0.6895308572166725 RNA PCR Primer, Index 1 (100% over 25bp)
TCTCCCAACCCTTGTACCAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 214423 0.6598029087171354 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 214090 0.6587782314735431 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 208078 0.6402786531297674 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 200851 0.6180403875458573 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 180223 0.5545657864022437 RNA PCR Primer, Index 1 (100% over 25bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 166947 0.5137140894474922 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 166345 0.511861669926043 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 156470 0.48147522013482785 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 149982 0.46151093798339454 RNA PCR Primer, Index 1 (100% over 28bp)
TCGAGGAGCTCACAGTCTAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 145807 0.44866400857799477 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 142380 0.4381187565846283 RNA PCR Primer, Index 1 (100% over 27bp)
TGCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTG 140970 0.43378003312076874 No Hit
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 139995 0.4307798520021424 RNA PCR Primer, Index 1 (100% over 26bp)
TCTCCCAACCCTTGTACCAGTGATGGAATTCTCGGGTGCCAAGGAACTC 139454 0.42911513611990976 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGATGGAATTCTCGGGTGCCAAGGAACTCCA 133917 0.412077184474952 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 130328 0.40103344084956755 RNA PCR Primer, Index 1 (100% over 25bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 118170 0.36362195157750754 RNA PCR Primer, Index 2 (100% over 34bp)
AGTGTTTCCTACTTTATGGATGTGGAATTCTCGGGTGCCAAGGAACTCC 108840 0.33491252610388356 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 108304 0.333263195765849 RNA PCR Primer, Index 1 (100% over 28bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 107342 0.3303030170621377 No Hit
CTGACCTATGAATTGACAGCCTGGAATTCTCGGGTGCCAAGGAACTCCA 97468 0.2999196443797622 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 96840 0.297987220028483 RNA PCR Primer, Index 1 (100% over 25bp)
TGTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTC 96179 0.2959532510854963 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 92739 0.2853679966772148 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 92546 0.28477411467116875 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTTGGAATTCTCGGGTGCCAAGGAACT 92005 0.28310939878893615 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 87152 0.2681761895902762 RNA PCR Primer, Index 1 (100% over 28bp)
TGTAAACATCCTACACTCTCAGCTTGGAATTCTCGGGTGCCAAGGAACT 83951 0.25832636419466304 RNA PCR Primer, Index 1 (100% over 25bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 80974 0.24916581117912412 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 77305 0.23787589884657037 RNA PCR Primer, Index 1 (100% over 24bp)
TCAGTGCACTACAGAACTTTGTCTGGAATTCTCGGGTGCCAAGGAACTC 76939 0.23674967701127064 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 76615 0.23575269374723484 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 76031 0.2339556621848987 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTTTGGAATTCTCGGGTGCCAAGGAACT 74066 0.2279091433150518 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 73355 0.22572131893008435 RNA PCR Primer, Index 1 (100% over 25bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 73196 0.22523205862458526 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTATGGAATTCTCGGGTGCCAAGGAACTCC 70720 0.21761313713769426 RNA PCR Primer, Index 1 (100% over 27bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 70170 0.21592072727590508 RNA PCR Primer, Index 2 (100% over 34bp)
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 67403 0.2074063671166856 RNA PCR Primer, Index 1 (100% over 33bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 65431 0.20133830848496145 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 64409 0.19819350325087315 RNA PCR Primer, Index 1 (100% over 27bp)
GCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTGC 63980 0.1968734235586776 No Hit
TCGGGCGCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAGATC 63767 0.19621799937583925 RNA PCR Primer, Index 7 (100% over 39bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 63522 0.19546410771013314 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 62866 0.1934455243113446 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 62862 0.1934332158759861 RNA PCR Primer, Index 1 (100% over 26bp)
CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 61229 0.18840829714089202 RNA PCR Primer, Index 1 (100% over 32bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 58075 0.1787030958607409 RNA PCR Primer, Index 1 (100% over 32bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 57442 0.1767552859652635 RNA PCR Primer, Index 1 (100% over 26bp)
CATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCCAG 55652 0.1712472611423496 RNA PCR Primer, Index 1 (100% over 29bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 53232 0.1638006577504771 RNA PCR Primer, Index 1 (100% over 29bp)
TCGAGGAGCTCACAGTCTAGTATGGAATTCTCGGGTGCCAAGGAACTCC 51989 0.15997581146283354 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 51985 0.15996350302747506 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATTCAGGATAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 50451 0.15524321806750305 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGATGGAATTCTCGGGTGCCAAGGAACTC 49109 0.15111373800473737 RNA PCR Primer, Index 1 (100% over 26bp)
TACCCTGTAGATCCGAATTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 47797 0.14707657120716025 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGCTTGGAATTCTCGGGTGCCAAGGAACTCC 47161 0.14511952998516403 RNA PCR Primer, Index 1 (100% over 27bp)
ATCCCGGACGAGCCCCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTC 46280 0.1424085970974617 RNA PCR Primer, Index 1 (100% over 31bp)
CTAGACTGAAGCTCCTTGAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 45782 0.14087619689533257 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCACCATCTGAAATCGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 44988 0.1384329724766769 RNA PCR Primer, Index 1 (100% over 28bp)
ATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 41584 0.1279584939866216 RNA PCR Primer, Index 1 (100% over 29bp)
TCTCCCAACCCTTGTACCAGTGGAATTCTCGGGTGCCAAGGAACTCCAG 41500 0.1277000168440938 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTTTGGAATTCTCGGGTGCCAAGGAACT 41369 0.12729691558610398 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 41262 0.126967664940265 No Hit
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 40702 0.12524448399007965 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCCA 40696 0.12522602133704194 No Hit
TGTGCAAATCCATGCAAAACTGTGGAATTCTCGGGTGCCAAGGAACTCC 39555 0.12171504015103929 RNA PCR Primer, Index 1 (100% over 27bp)
CTAGACTGAAGCTCCTTGAGGATGGAATTCTCGGGTGCCAAGGAACTCC 38956 0.11987185195610885 RNA PCR Primer, Index 1 (100% over 27bp)
GTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTCC 37816 0.11636394787894579 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGATGGAATTCTCGGGTGCCAAGGAACTCCAG 37388 0.11504694529558984 RNA PCR Primer, Index 1 (100% over 29bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 36881 0.11348685111390418 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 36654 0.11278834740731118 RNA PCR Primer, Index 1 (100% over 28bp)
TGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 35915 0.11051436397483443 No Hit
CAAAGAATTCTCCTTTTGGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 35495 0.1092219782621954 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 32990 0.10151382061895553 RNA PCR Primer, Index 1 (100% over 26bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 33208965 27.179695 365.57114 28
AATTC 33612290 27.061014 360.28348 26
ATTCT 33136960 26.095528 352.04224 27
TCTCG 32975890 24.346136 329.74524 29
TGCCA 31438685 23.729599 335.34402 36
GCCAA 30027070 23.17029 343.96896 37
CCAAG 29945050 23.106998 343.98593 38
GAATT 33511385 22.906271 306.5482 25
GAACT 31290950 22.725267 323.25864 43
CTCGG 32711515 21.786049 297.43896 30
AACTC 25382065 21.712067 380.52515 44
GGAAT 33670205 20.76118 276.41693 24
GTGCC 31106905 20.717371 296.02713 35
TGGAA 33316830 20.54329 276.3039 23
CAAGG 29921535 19.602814 292.14804 39
GGAAC 28577115 18.722029 291.70663 42
AAGGA 29459680 18.570639 281.09506 40
TCGGG 32561090 18.411654 252.64821 31
AGGAA 28781820 18.143332 281.18314 41
CGGGT 32042970 18.118681 251.59415 32
GGTGC 31557465 17.844152 251.52115 34
ACTCC 19557380 17.386839 395.46683 45
GGGTG 31920785 15.324399 213.62947 33
TTGGA 17824090 10.750315 164.58797 22
CTCCA 9669675 8.596504 152.48781 45
TCCAG 7757665 5.8554063 66.51818 10
CCAGT 7352505 5.549596 46.95332 7
CTTGG 7616735 4.7743955 55.716064 21
CTGGA 5889920 3.7744308 30.60829 16
TTCAA 4667570 3.7578273 87.72326 1
ACTTG 4976335 3.535146 43.22381 7
CAGTC 4590000 3.4644852 19.902279 42
ATGGA 5487870 3.383842 43.84394 22
GACTG 5265955 3.3745756 68.2312 11
TGTTG 5399455 3.1854527 61.805622 17
ACCAG 4042940 3.1197214 45.545403 16
GTTGG 5643095 3.0031908 52.446953 21
GTGGA 5417090 2.9472985 48.26568 22
TGATG 4791870 2.8901396 63.638206 14
AAGTA 4091425 2.8590987 78.21631 4
AGTCA 3920355 2.8471851 19.145187 43
AACAT 3431415 2.8243058 81.38126 1
GCACT 3662840 2.7646742 46.634586 5
AATCC 3196000 2.7338898 73.608055 8
TTTGG 4586925 2.7060943 48.8104 21
TCACC 2944460 2.6176744 23.458092 45
GCTGT 4141400 2.5959525 62.04809 11
CCCAA 2821530 2.5644078 54.22341 4
CAACG 3238885 2.4992747 74.11223 7
GTCAC 3266590 2.4655888 19.910753 44
CACCA 2701845 2.4556298 16.784613 45
AGCTT 3320425 2.3588016 74.639244 2
GTTGA 3825265 2.307147 60.041027 18
TCCCA 2583885 2.2971175 53.1287 3
CTGAT 3232130 2.296078 75.37479 13
AGAAC 3076055 2.2838986 46.212803 15
ACTGA 3141125 2.2812636 76.73288 12
TTGAC 3198725 2.2723472 49.820602 19
AGTTG 3756405 2.2656155 37.565872 9
GTAGT 3732210 2.2510226 52.827114 5
TGACT 3158510 2.243779 44.072086 20
ATTCA 2771205 2.2310772 79.9484 4
TTGTA 3246110 2.170365 49.97116 13
AGTAG 3493195 2.1539178 52.952866 7
GCTTG 3407330 2.1358156 53.089222 20
GTAGA 3403430 2.0985684 40.65649 7
AGACT 2856380 2.0744655 76.99056 10
TCAGA 2826240 2.0525763 80.07039 8
AGCTG 3192305 2.0457208 39.705936 2
AAAGC 2753160 2.044157 45.444904 11
ACTGG 3187260 2.0424879 29.30484 15
CCAGA 2642420 2.0390146 29.469324 25
AAGCA 2740360 2.0346532 45.414738 12
TTATC 2509825 1.9765006 83.12164 5
TACCA 2304665 1.9714329 51.12835 15
TATCA 2435370 1.9606988 84.97548 6
ACATT 2426410 1.9534854 79.83083 2
CTTGT 2790200 1.9388338 42.057175 8
CAGTG 3023365 1.9374593 31.031918 18
CAAGT 2664225 1.9349117 79.7344 3
TCGGT 3084450 1.9334248 61.713696 15
CCTTG 2618370 1.9331454 61.01407 10
CATTC 2300115 1.9245591 83.24489 3
TCAAC 2237700 1.9141506 83.08544 6
CTGTT 2750185 1.9110285 57.515423 19
GGCTT 3043655 1.9078532 58.30929 19
CAGAC 2471580 1.9071866 81.49922 9
CACTA 2223825 1.9022816 51.886444 15
GGTAG 3493520 1.9007338 47.303745 4
CTTAT 2411990 1.899455 82.87226 4
CTGTC 2553080 1.8849418 72.90593 12
GTAAT 2744990 1.8763022 75.192604 6
ATCAG 2558275 1.8579648 76.69246 7
AGTAA 2623980 1.8336442 76.86944 5
TCAAG 2491170 1.8092294 79.42071 2
AAGCT 2483525 1.8036771 45.32903 1
ACTAC 2094925 1.7920194 51.737934 16
CAGGA 2731040 1.7892152 73.42268 12
TGTGG 3347335 1.7814136 23.738073 21
GATGG 3261395 1.7744406 25.81845 21
TAGCT 2485270 1.7655146 74.3564 1
ATCCA 2058245 1.7606429 73.61806 9
AGGAT 2845375 1.7544695 67.755264 13
GTTTG 2967300 1.750583 44.1683 20
AGTGG 3184195 1.7324381 21.074753 16
CTACT 2069065 1.7312342 50.35637 17
AGCAC 2234230 1.7240362 47.134464 13
ATGTT 2573120 1.7204006 70.540085 16
GCTTA 2418180 1.7178545 74.77086 3
GATGT 2841190 1.7136183 63.66155 15
AACGC 2214055 1.7084682 74.22873 8
ACGCT 2190490 1.6533595 72.59953 9
TCTCC 1895400 1.648232 51.562553 1
TCTGA 2308350 1.6398321 8.444516 18
GGATA 2629370 1.62128 67.689224 14
TAATC 2008645 1.6171457 69.27201 7
AGGCT 2492000 1.5969453 52.610016 18
ATAGG 2563565 1.5807043 68.30937 16
CGCTG 2372765 1.5802746 64.24007 10
GATAG 2558690 1.5776983 68.5993 15
TGCAC 2075090 1.5662568 47.639446 4
CCAGG 2256120 1.5361459 59.985924 11
ACCCT 1720585 1.5296291 53.24428 8
AACCC 1676015 1.5232822 54.364796 7
AACTG 2095670 1.5219947 45.042255 17
ATCCC 1705050 1.515818 60.22768 8
CTCCC 1576875 1.4569443 55.087345 2
CAGTT 2048820 1.4554642 44.235317 8
TGAGG 2665445 1.4501996 46.841335 1
TAGTA 2114370 1.4452502 59.85164 6
AAGAA 2017100 1.4410348 45.125996 14
TGTCG 2292655 1.4371042 61.79211 13
GCTGG 2516070 1.4227107 23.069551 2
TAGAA 2021615 1.4127097 42.857426 8
GTCGG 2481530 1.40318 55.790184 14
TAGTT 2090250 1.3975513 48.18454 18
CGGTG 2457400 1.3895357 55.618973 16
AGGTA 2229065 1.3744503 56.224796 3
TACTT 1732150 1.3640773 42.31099 18
CACTT 1620790 1.3561523 50.681427 6
AAAGT 1940380 1.3559426 44.362984 4
TAGGC 2037835 1.3059033 53.670624 17
GAGGT 2399690 1.3056092 49.85855 2
CTGTG 2081195 1.3045548 26.094221 21
ACTGT 1835335 1.3038063 43.8908 18
CCCTT 1498860 1.3034024 52.532505 9
TGAGT 2157085 1.3010112 50.574703 19
AACTT 1606060 1.2930274 28.918026 29
GGTGA 2376375 1.2929242 51.05783 17
ATAAA 1631475 1.2920613 48.306446 2
CAACC 1417045 1.2879118 54.39044 6
CAGAA 1733340 1.2869644 28.353477 26
CATAA 1554245 1.2792575 50.07056 1
CCAAC 1406900 1.2786912 54.437996 5
TGTAT 1889615 1.2634058 45.316254 14
AGAAA 1761445 1.2583925 46.548878 9
GCCTG 1875685 1.2492166 31.635342 17
TATTG 1860980 1.2442603 33.11901 1
TTGTC 1785895 1.2409697 42.05483 9
CCCCC 1251535 1.2286181 23.646297 1
CTTTG 1761495 1.2240148 17.83713 17
AGTTT 1819980 1.2168475 34.836132 19
TCCCG 1549690 1.2156445 37.76923 12
TGTAC 1695690 1.2046038 42.48609 13
CTGCC 1527705 1.1983985 48.78814 4
ATTGC 1664530 1.1824679 44.76973 2
CCAAA 1344805 1.1760507 41.905117 11
CCTGT 1584435 1.1697901 33.933167 18
GTAAA 1673900 1.1697258 35.48811 2
TAAAG 1671010 1.1677061 42.688942 3
AGCAG 1756775 1.1509347 31.477308 16
GCAGC 1689990 1.1506796 32.298965 17
TTGCA 1615560 1.1476802 44.83832 3
GTGAG 2094205 1.1394027 46.85042 18
TCCTT 1389905 1.1375601 18.583132 9
ATTGT 1670750 1.1170715 34.36859 12
AAACA 1305390 1.0984272 43.39008 4
ACATC 1283385 1.0978202 44.147465 6
ATAGT 1603880 1.0963113 45.481594 17
CATCC 1229445 1.0929972 45.797005 7
TGAAG 1764065 1.0877295 38.53045 12
TTGAA 1579735 1.0798074 42.807804 11
CAGCT 1415650 1.0685182 38.43484 18
GCCAG 1563875 1.0648106 42.36575 6
GTATA 1547635 1.0578659 44.7366 15
TATAG 1523570 1.0414164 44.657097 16
TTCTG 1497410 1.0405093 18.838991 16
CAAAA 1234950 1.039155 40.62288 12
CCCGG 1466170 1.0375053 34.078922 13
GAAAG 1643770 1.036191 38.862724 10
GTACC 1372360 1.0358434 45.037815 14
TTTGT 1577485 1.0316736 18.29664 18
ACAGT 1410600 1.0244579 21.984337 4
TCACA 1193775 1.0211668 27.837454 2
GACTT 1436095 1.0201896 24.399515 21
GCTAA 1391385 1.010503 38.381886 10
CAGAT 1386500 1.0069551 12.632452 44
TAAAC 1221405 1.0053058 42.443684 3
GCTGC 1476470 0.98333716 41.342804 3
GGCTG 1737355 0.9823866 21.539043 1
TGGCT 1548015 0.97034174 19.363338 8
GGCCT 1449305 0.9652451 32.192184 16
CACAG 1250640 0.96505225 25.164852 3
GTCCC 1219765 0.9568369 37.834618 11
CCGGC 1348410 0.9541748 34.064754 14
GAAGA 1507670 0.950397 39.205643 13
TGTAA 1386450 0.9476899 34.639732 1
TAGAT 1382565 0.9450342 34.503067 9
GATTG 1564330 0.9435006 31.254957 11
CGGCC 1322920 0.93613744 34.1009 15
ACTTT 1187055 0.93481207 19.524473 16
AAAAG 1299215 0.92817116 34.432106 13
TAGTG 1529975 0.9227798 24.244625 15
GAATC 1255900 0.91210604 34.886948 6
GAGTT 1475865 0.89014435 33.295067 20
TCAGT 1251545 0.8890869 17.47366 1
AGATT 1298680 0.88769585 34.602882 10
CATGG 1360185 0.8716457 6.0072074 9
TGTCC 1178000 0.8697187 34.80396 10
TGCTG 1384905 0.8680996 6.6949677 16
CGGAA 1314235 0.86100876 31.422974 4
AGTGT 1395285 0.8415438 22.84257 19
TCCGA 1102045 0.8318123 30.860228 7
ACGGA 1266010 0.8294146 31.439926 3
GGGTT 1546245 0.82289404 20.57546 19
ATTGG 1337805 0.8068756 9.2197485 16
TGTTT 1229870 0.8043336 6.4564514 19
AGATC 1105860 0.80313843 12.617876 45
CATTG 1128180 0.8014495 9.608257 1
GCTTT 1150235 0.79926693 13.619232 24
TTACC 946345 0.79182863 31.914825 22
CTGAA 1071750 0.7783659 6.5505857 6
ATTTG 1162365 0.7771629 15.160325 15
TTTTG 1181615 0.77277493 13.822237 14
CTGCT 1037330 0.76586187 16.734537 8
TAAAT 987095 0.76466143 17.518324 12
TGGTA 1267040 0.7641949 23.151241 12
AACGG 1153895 0.7559635 31.388058 2
TATGG 1246125 0.75158024 7.2316003 22
TACAG 1027390 0.74614906 17.097342 10
GTCTG 1178855 0.7389413 6.8745065 17
CCATG 967755 0.7304515 6.9168763 8
CTACA 849680 0.7268246 19.238066 9
CCGAT 962855 0.7267531 29.13936 8
CCCCA 766215 0.7237504 21.993158 3
GGTTA 1173405 0.7077204 23.120455 20
GGTCC 1046760 0.6971479 27.321117 5
ATCCT 829495 0.6940575 26.616165 8
CTCCT 797090 0.69314617 18.030231 10
TGTCT 996915 0.692729 9.51183 10
GACCT 906425 0.68416035 6.215884 5
GGTTT 1159645 0.6841422 11.84703 19
AGGTT 1130155 0.6816349 15.052325 18
GAAGC 1037470 0.67968875 22.310894 19
GTGAT 1125580 0.67887557 9.351624 5
CAAAG 913245 0.678063 19.96956 1
TTCAG 953625 0.6774471 19.564402 10
CCCAC 710800 0.67140657 21.323048 4
CGATG 1036470 0.6641998 24.919588 9
CTGGT 1052060 0.65946245 25.942833 3
GTCCG 988550 0.65837973 27.324398 6
AATTT 868280 0.65792674 17.115862 14
TGGTC 1038240 0.65079963 25.654694 4
CTTGA 912975 0.64856964 16.106726 11
AAGTT 941680 0.6436731 20.782957 13
CCACT 721485 0.64141226 20.087206 5
AGCTC 848080 0.6401221 8.505488 7
GTTAC 900735 0.63987446 27.104355 21
GGCTA 995235 0.6377753 19.479883 9
TAGGT 1056435 0.6371718 15.27623 17
TTGAT 948965 0.6344827 19.693924 19
AGAAT 905990 0.63310814 14.584307 4
ATGGT 1042365 0.6286857 23.148031 11
TGGGT 1180365 0.6281768 20.2973 18
GAGCT 960455 0.6154872 7.0884924 6
AAATT 793795 0.61492 17.496374 13
TTCAC 727460 0.6086825 25.37311 1
AGTTC 847095 0.60176915 21.613216 14
CACTG 797190 0.60171086 17.243256 6
CTTTT 780490 0.601213 15.982375 13
CTGTA 846285 0.60119367 15.761701 19
TTGTT 912860 0.5970095 13.790941 19
TTTGA 890870 0.59564006 15.063522 16
GTGGT 1106685 0.5889651 7.3020716 15
ATCTG 824790 0.5859238 6.212403 8
GTTTC 836455 0.5812297 5.25397 7
CTATG 800775 0.56886375 6.2377114 4
CCTAC 638995 0.56807727 11.974568 10
CTAAG 773125 0.5614873 22.05123 11
GTGCA 873795 0.55995303 15.576543 4
TAAGT 814665 0.55685365 20.760698 12
AATGG 901600 0.55593014 5.5839176 23
TCCTA 660990 0.55306554 11.300133 9
CTGGC 830115 0.55286115 14.848668 21
AGTGC 859310 0.5506706 15.588943 3
ACTGC 727680 0.5492454 17.057508 7
AAAGA 760215 0.5431046 14.852649 2
GTTCT 780280 0.54219526 18.742342 15
TAATT 702135 0.5320327 18.162157 7
ACAGA 710135 0.5272586 18.455936 11
CCCCG 620685 0.5173223 16.580414 10
TGAAA 738755 0.51624393 6.7231383 11
GTGGG 1069860 0.51361394 18.322924 17
TCCCC 550880 0.5089823 18.375248 9
GGAAG 910945 0.50669044 20.256012 18
GATCA 697660 0.5066804 5.668077 45
CTAAA 615260 0.50640404 18.57619 11
GTGTG 940075 0.50029725 16.469948 20
CAGCA 645970 0.49846062 15.011997 4
TAGCA 677780 0.4922424 20.347662 1
TTATG 723970 0.48404986 5.22055 17
GGTGG 990955 0.47573355 5.9314046 6
GGGCT 828800 0.46864453 11.04469 18
TTTCC 572270 0.46837124 6.0870824 8
TGCTA 658415 0.4677324 16.010986 9
ACCAT 545085 0.46627104 7.7685595 5
TTGTG 784955 0.4630907 7.3299007 13
GGTTG 864660 0.46016222 9.826014 11
CTCAC 516935 0.45956394 9.596096 9
GTGTT 772575 0.455787 7.2052817 20
CTCAG 600555 0.4532928 7.5569487 18
CGTGG 800125 0.4524303 5.932339 21
GAGTG 822215 0.4473459 15.868236 20
GTGGC 785405 0.44410688 17.653336 7
CCTTT 542335 0.44387108 16.95802 12
TTCCT 538635 0.44084284 6.1349597 9
CCTAT 525120 0.43937996 6.493023 3
CATCT 521470 0.43632594 6.3912683 7
CGACT 577845 0.4361515 15.567125 13
CCGAC 538570 0.43191314 16.009356 12
GTGCT 688670 0.4316788 6.5721793 15
CCCAT 484120 0.43039075 5.0681176 1
ACTCT 514065 0.43013 5.8936973 15
CGCCT 546580 0.4287612 7.672707 28
GCCCA 534405 0.42857298 6.5224113 11
CCCGA 533070 0.42750227 15.941185 11
GATGA 683330 0.42134398 10.906296 7
TCAGG 650660 0.41696167 15.607724 11
TCTGT 600030 0.41694447 12.453378 17
ACCCA 455440 0.41393644 6.6581182 14
ATGAA 592050 0.41372606 7.299842 8
TGGAT 676215 0.40784824 5.5740533 17
TGAAT 596385 0.40765122 6.241311 9
GGTCT 642085 0.40247795 8.512355 16
TTTCT 516515 0.3978725 5.652743 26
GTTGT 673350 0.39724836 10.8435 12
TGGTT 667870 0.39401543 6.8399215 8
CGGTC 590830 0.39349604 9.047945 15
GCATT 550760 0.3912552 8.599724 1
CCCAG 485110 0.38904014 5.887027 15
GAAAT 548395 0.38321984 6.41669 12
TCGCC 483710 0.37944323 7.972398 27
AAATC 460365 0.37891412 7.456243 13
TCGCT 511990 0.3780028 6.6528187 11
CTCGC 478930 0.3756936 8.581655 26
CTAGA 513605 0.37300918 6.0750866 2
AATTG 537310 0.36727127 8.049281 11
GTCGC 549625 0.36605328 5.71186 10
GCTGA 571090 0.36597094 5.683519 8
CACTC 408235 0.36292776 7.669187 14
CTTTA 458435 0.36102 5.794541 15
TGGGC 635990 0.3596202 11.989968 17
TGGTG 668385 0.3557069 5.588365 5
TACCC 397795 0.35364643 5.5395875 20
TTTAT 475645 0.35253984 5.506915 16
AAATA 440445 0.34881443 12.292279 12
CACGT 460975 0.34793922 11.373088 7
ACCTA 406575 0.3477882 6.8852305 6
GTCTC 461555 0.34076658 9.994012 11
GCACC 420080 0.33688858 7.393993 3
ATTGA 492495 0.33663857 8.038191 12
TTGGG 625955 0.33312613 11.582972 16
GAAAC 443300 0.32913986 5.5442977 11
AGTCT 456845 0.32453883 8.155883 14
GCTCA 429755 0.32437468 8.398581 8
GTAGG 584625 0.31807932 10.016448 8
AAACC 363705 0.3180651 6.446821 12
GTTCA 434005 0.30831346 8.16237 10
TCTGC 409635 0.30243397 7.9533343 17
ATACC 353370 0.30227613 5.831722 19
TAGAC 415940 0.30207926 5.983042 3
ACTAG 412310 0.29944298 6.009044 1
ATATT 383840 0.29084927 11.386933 14
GAGGA 522880 0.290839 6.0591984 3
GCCAT 383315 0.28932226 5.0025897 7
GCCTT 391785 0.2892553 5.4462786 29
AGCCC 360525 0.28912768 7.647432 10
AATAT 371945 0.28813034 11.641243 13
ATGAC 391055 0.28400636 5.988391 8
ATCGG 437215 0.28017995 5.620013 15
TCGAG 434270 0.27829275 6.9116383 1
GGAGC 478610 0.27667385 6.294726 5
GGTTC 440245 0.27595863 7.1794004 9
AGACC 357455 0.27582896 6.329887 4
CGTAA 375550 0.2727458 10.928718 9
CTAGT 380560 0.27034658 7.359378 17
CGAGG 465045 0.2688322 6.302984 2
ATGCT 373885 0.26560473 5.5817957 6
GCACG 389285 0.26505622 10.292178 6
GTCTA 365575 0.25970137 8.092109 15
ACACT 303475 0.25959548 7.3883195 13
AATCG 351835 0.25552258 6.3585896 14
ACGTA 351585 0.25534102 10.921527 8
GCTCC 324885 0.25485396 6.276148 11
TCTAG 351835 0.24994059 7.570523 16
TTGGT 422405 0.24920133 5.6737595 4
GTATT 368870 0.2466283 6.174726 21
CCATC 274935 0.2444218 6.6196795 6
TGTGC 381915 0.23939563 6.5109715 14
TATGC 325615 0.23131412 5.5639896 5
AAGTG 369805 0.22802323 5.3340044 3
CTAGC 296300 0.22364421 6.0757456 8
GCGTG 380225 0.21499805 5.675803 20
TGCCT 290215 0.21426605 5.5681596 1
TTGGC 339000 0.21249527 6.9262667 17
AGGAG 378090 0.21030313 6.0196495 4
GCCTA 275085 0.20763135 5.447251 2
AAGAT 281460 0.19668499 5.7572756 16
GGCGT 343870 0.19444112 6.0465136 19
TACAC 226985 0.1941652 7.2796483 12
TAGCC 249410 0.1882521 6.089161 9
TGGCG 325580 0.18409906 5.8047857 18
CCTAG 229210 0.17300537 6.075858 7
CGGTT 271855 0.17040679 5.1310225 17
AGATA 202775 0.1416997 5.0794587 17